The contents of Mesquite_Folder should be approximately as follows: Place this Mesquite_Folder where you want on your hard drive, though if it is in a folder that requires a password for you to modify, you may have problems updating in the future. ![]() Extract all of the files from the tgz.Download the latest version of Mesquite from the Mesquite Github repository.First, however, you may want to take from Mesquite_Folder/mesquite any third party packages (e.g., PDAP, TreeSetViz) before deleting the directory. If you have an older version of Mesquite, you may want to delete it (by deleting Mesquite_Folder), so as to avoid getting confused as to what version of Mesquite is starting up.You may need to make adjustments so that your system knows to use Java 8 (e.g., see instructions here ). The only workaround we know is to use Java version 8 (i.e. This is due to a bug in Oracle Java that causes Mesquite to crash during startup with a StackOverflowError. (It is best to get the Sun-Oracle Java VM Mesquite does not run on some third-party virtual machines.) At the moment, Mesquite does not run on Linux with Oracle Java version 11 and above. Requirements: JRE or JDK 1.8 ( /download).
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